BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F04LP1|AL427645
(1025 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1569 1980 0.0
3x_Contig1712 153 6e-37
3x_Contig1799 145 2e-34
3x_Contig1772 143 6e-34
>3x_Contig1569
Length = 11625
Score = 1980 bits (996), Expect = 0.0
Identities = 1021/1028 (99%), Gaps = 3/1028 (0%)
Strand = Plus / Plus
Query: 1 agatcccctgatgccccatcttacgraa-catgaacgtattttacaatgctgcaaaccag 59
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 6264 agatcccctgatgccccatcttacggaaacatgaacgtattttacaatgctgcaaaccag 6323
Query: 60 ggtaccaatatgaataccttatattcacaatcggtacccaatgcacctcagggtatatca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6324 ggtaccaatatgaataccttatattcacaatcggtacccaatgcacctcagggtatatca 6383
Query: 120 gctccgctatcagctcaaccggtcaatgtcacaaatatacctaacgggaacgtcaactcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6384 gctccgctatcagctcaaccggtcaatgtcacaaatatacctaacgggaacgtcaactcg 6443
Query: 180 gaacttgatgactttttcctacgacagagcgccggttggatcgaaggaaactctagtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6444 gaacttgatgactttttcctacgacagagcgccggttggatcgaaggaaactctagtaat 6503
Query: 240 gatgatttcttgggatggtttgatatgaacatggctcccgaattttaacaatattctacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6504 gatgatttcttgggatggtttgatatgaacatggctcccgaattttaacaatattctacc 6563
Query: 300 tcacttccgaccttcttttctcttcaatttcaatttaattttttcccccgtaacgaaccc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6564 tcacttccgaccttcttttctcttcaatttcaatttaattttttcccccgtaacgaaccc 6623
Query: 360 acacctaatgaactaacacttcctatcatttgttttattacattattatcattttatttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6624 acacctaatgaactaacacttcctatcatttgttttattacattattatcattttatttt 6683
Query: 420 attattatatttyatttttytttttttttgaccatggggcttatcttctcctctgacttt 479
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6684 attattatattttatttttttttttttttgaccatggggcttatcttctcctctgacttt 6743
Query: 480 cctttaacgacatgaccctgttctgtgatgacatatttattgtttgttttgtagtacata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6744 cctttaacgacatgaccctgttctgtgatgacatatttattgtttgttttgtagtacata 6803
Query: 540 ctctattcttaataaaaacttaattaatctacaattccaatccttctatctcaagcactt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6804 ctctattcttaataaaaacttaattaatctacaattccaatccttctatctcaagcactt 6863
Query: 600 tatttgaattaaataattacagagtaatatttgatattcataagtgaaatctcacatcaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6864 tatttgaattaaataattacagagtaatatttgatattcataagtgaaatctcacatcaa 6923
Query: 660 attcatataattgcttaccagtgaaaacattgaagtcaaacagcgttagatcccaaattt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6924 attcatataattgcttaccagtgaaaacattgaagtcaaacagcgttagatcccaaattt 6983
Query: 720 ttccattctacaacaaaaataagccatcttagtataggggttattacacatcgttgtggc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6984 ttccattctacaacaaaaataagccatcttagtataggggttattacacatcgttgtggc 7043
Query: 780 cgatgaaacccaggttcgattcctggaggtggcattattttttctatcaacaagaaaaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7044 cgatgaaacccaggttcgattcctggaggtggcattattttttctatcaacaagaaaaag 7103
Query: 840 ctggctcatctctgcagatgattaaagatcaaatgatgaaatacagtgcattcttcggag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7104 ctggctcatctctgcagatgattaaagatcaaatgatgaaatacagtgcattcttcggag 7163
Query: 900 cttcttgatgacatattaggaataacctatggaaacaagctattatagataatcaacgaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7164 cttcttgatgacatattaggaataacctatggaaacaagctattatagataatcaacgaa 7223
Query: 960 cgttccctaattgtgt-ataagtaattcaagttattgactctgccagt-cctctgtctct 1017
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7224 cgttccctaattgtgtaataagtaattcaagttattgactctgccagtacctctgtctct 7283
Query: 1018 ttctytat 1025
|||| |||
Sbjct: 7284 ttctctat 7291
>3x_Contig1712
Length = 23668
Score = 153 bits (77), Expect = 6e-37
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 742 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9799 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 9858
Query: 802 ctggaggtggcattatttttt 822
|||||||||||||| ||||||
Sbjct: 9859 ctggaggtggcattctttttt 9879
>3x_Contig1799
Length = 39855
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 742 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30355 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 30414
Query: 802 ctggaggtggcat 814
|||||||||||||
Sbjct: 30415 ctggaggtggcat 30427
>3x_Contig1772
Length = 25851
Score = 143 bits (72), Expect = 6e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 742 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11963 gccatcttagtataggggttattacacatcgttgtggccgatgaaacccaggttcgattc 11904
Query: 802 ctggaggtggca 813
||||||||||||
Sbjct: 11903 ctggaggtggca 11892
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9310
Number of Sequences: 1807
Number of extensions: 9310
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 4
length of query: 1025
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1009
effective length of database: 10,329,639
effective search space: 10422605751
effective search space used: 10422605751
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)